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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7934104 chr11:49248190 T/C FOLH1B chr11:89372395-89431886:+ 0.34 5.95 5.29E-9 Box Plot
THCA rs7934343 chr11:49528287 C/G FOLH1B chr11:89372395-89431886:+ -0.35 -6.43 3.18E-10 Box Plot
THCA rs7934977 chr11:77339149 T/G INTS4L1 chr7:64601603-64694600:+ 0.36 6.26 8.43E-10 Box Plot
THCA rs79365419 chr2:112976564 C/T RGPD5 chr2:110550335-110615272:+ -0.51 -7.16 3.03E-12 Box Plot
THCA rs79372518 chr5:43673588 T/C UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs79374570 chr2:132193554 C/G CCDC74B chr2:130896860-130902707:- 0.4 6.96 1.13E-11 Box Plot
THCA rs79378339 chr6:151762609 A/G NEK5 chr13:52607747-52703214:- 0.64 7.51 2.87E-13 Box Plot
THCA rs79385461 chr16:20451430 A/G ZMYND12 chr1:42896000-42921938:- 0.26 5.88 7.73E-9 Box Plot
THCA rs79402747 chr5:45980269 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.07 5.65E-15 Box Plot
THCA rs7942630 chr11:49267486 T/A FOLH1B chr11:89372395-89431886:+ 0.35 6.07 2.65E-9 Box Plot
THCA rs79430269 chr3:90403309 G/A STX19 chr3:93733213-93747454:- 0.49 6.99 9.05E-12 Box Plot
THCA rs7943055 chr11:77261051 C/T INTS4L1 chr7:64601603-64694600:+ 0.35 5.94 5.65E-9 Box Plot
THCA rs7943742 chr11:77268856 C/T INTS4L1 chr7:64601603-64694600:+ 0.35 6.05 2.95E-9 Box Plot
THCA rs7946443 chr11:48545504 G/A FOLH1B chr11:89372395-89431886:+ 0.43 6.32 6.12E-10 Box Plot
THCA rs79472513 chr3:96806576 T/A PRPF31 chr19:54618790-54635150:+ -0.38 -6.03 3.34E-9 Box Plot